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DROPPS documentation
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DROPPS documentation

User Guide

  • Overview
  • Download DROPPS
  • Installation Guide
  • First Simulation
  • Input Files
  • Index File (NDX)
  • Simulation Workflow
  • FAQ

Modelling Tools

  • DROPPS protein builder
  • Add angle terms
  • Modify residue
  • Generate elastic network
  • Generate mesh-like box
  • Edit configuration
  • GSD file to xtc converter

Simulation Tools

  • Simulation preprocessor
  • Run simulation

Analysis Tools

  • Check trajectory
  • Extract frame
  • Trajectory converter
  • Make index
  • Density profile
  • Mainchain angle
  • Gyrate radius
  • Contact map
  • Inter-chain distance
  • Intra-chain distance
  • Mean square deviation

Releases

  • Releast 0.2.1
  • Releast 0.3.0

Community

  • Citing DROPPS
  • Report a Bug
  • Contact & Support
    • Citing DROPPS
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